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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924517.1_cds_XP_016472859.1_65048
CDS Infomation

[gene=LOC107794836] [db_xref=GeneID:107794836] [protein=putative pectinesterase 11] [protein_id=XP_016472859.1] [location=complement(join(8533..8734,8840..9072,9289..9477,9637..9796,9997..10256))] [gbkey=CDS]
Sequence

ATGGATGCTGCTTCATTGATAATCAAATTTCATGTTATATTTTTCATACTTCTACTAGTT
TGTTCTAATAGTAATTCAACTTTAGCCATGGCTGCTAATGACTCTAGTTCAGGAGGAGTT
ACAAACTTTTCTACGGCCATTCTTATTAGAGTAGACCAATCTGGTCAAGGAGATTTCAAG
AAAATCCAAGACGCTATTGATGCTGTTCCATCGAATAATTCTGAATTATTCTTCATTTGG
GTTAAGCCTGGGACTTATAGAGAGAAGATTGTGGTTCCTGGTGATAAGCCATTCATAACG
TTGAGTGGAACTGAGGCTTCTAACACCATAATTACATGGAGTGAAGGTGGAGATATTACT
GATTCTCCTACACTAACTGTATTAGCTTCCGATTTTGTTGCAAGATATCTAACAATTCAG
AATTCATTCGGAACAAGTGGAAAAGCTGTAGCACTAAAGGTTAAAGGAGATAGAGTAGCA
TTCTATGGATGTAGAATTCAATCGTACCAGGACACTTTGTTAGACGATGCTGGGAGGCAT
TATTATAGCAACTGCTATATTGAAGGGGCCGTTGATTTCATTTTTGGAAATGCAGCATCT
CTCTATGAAAGGTGCCATATTCATTCAGTTGCAGCAGGAGCAATAACTGCTCAAGGAAGA
GAGTCCCCTTTAGAAAATACAGGATTTACTTTTTTGGGTTGCAAGATAACAGGAACAGGA
GGGAGCACTGCATTAGGGAGGCCATGGGGTTCATATTCGAGGGTGGTATTTGCCTACACA
TTTATGTCCTCTATCATACAGCCTGAGGGATGGAATGACTGGGGAGATTCTACCAAGCAA
AGCACTGCATACTATGGTGAATACAAGTGTTATGGAGCAGGGGCTAATAGATCAAAGAGG
GTGGGTTGGTCACGTAGCCTATCGAACGAGGAAGCTGCACCATTTCTGACCAAGAATATG
ATCGGAGGGCGAAGTTGGTTAAGGCCTGCGCCTACCCATTTCAAGAGACGTTCAACTATT
GTAACTCCCACCGGAGAAAACTAA

Peptide Sequence

PEP ID

XP_016472859.1
PEP Infomation

PREDICTED: putative pectinesterase 11 [Nicotiana tabacum]
Sequence

MDAASLIIKFHVIFFILLLVCSNSNSTLAMAANDSSSGGVTNFSTAILIRVDQSGQGDFK
KIQDAIDAVPSNNSELFFIWVKPGTYREKIVVPGDKPFITLSGTEASNTIITWSEGGDIT
DSPTLTVLASDFVARYLTIQNSFGTSGKAVALKVKGDRVAFYGCRIQSYQDTLLDDAGRH
YYSNCYIEGAVDFIFGNAASLYERCHIHSVAAGAITAQGRESPLENTGFTFLGCKITGTG
GSTALGRPWGSYSRVVFAYTFMSSIIQPEGWNDWGDSTKQSTAYYGEYKCYGAGANRSKR
VGWSRSLSNEEAAPFLTKNMIGGRSWLRPAPTHFKRRSTIVTPTGEN

Transcript Sequence

Gene sequence data has not been registered.